Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Mir6404-201ENSMUST00000183699 94 ntBASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a3bpQ9EQG9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a3bpQ9EQG9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a3bpQ9EQG9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Col4a3bpQ9EQG9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms