Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdc40Q9DC48 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Gm13312-201ENSMUST00000119631 718 ntBASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Gm15372-201ENSMUST00000120729 834 ntBASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdc40Q9DC48 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdc40Q9DC48 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Gm15165-201ENSMUST00000118140 502 ntBASIC14.65□□□□□ -0.06
Cdc40Q9DC48 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdc40Q9DC48 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms