Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rrp8Q9DB85 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Gm19164-201ENSMUST00000210667 640 ntBASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rrp8Q9DB85 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rrp8Q9DB85 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gm18489-201ENSMUST00000172565 551 ntBASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gm44492-201ENSMUST00000197012 141 ntBASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gm9682-201ENSMUST00000197505 556 ntBASIC15.42■□□□□ 0.06
Rrp8Q9DB85 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms