Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb4aQ9D6F9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb4aQ9D6F9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubb4aQ9D6F9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Tubb4aQ9D6F9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb4aQ9D6F9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb4aQ9D6F9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb4aQ9D6F9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubb4aQ9D6F9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubb4aQ9D6F9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tubb4aQ9D6F9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms