Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx56Q9D0R4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx56Q9D0R4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx56Q9D0R4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 App-207ENSMUST00000227737 2827 ntBASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx56Q9D0R4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx56Q9D0R4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx56Q9D0R4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms