Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Gm10252-201ENSMUST00000209541 832 ntBASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ssr1Q9CY50 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ssr1Q9CY50 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.15■□□□□ 0.34
Ssr1Q9CY50 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Gm22697-201ENSMUST00000175194 63 ntBASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Gm36967-201ENSMUST00000193814 266 ntBASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms