Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx47Q9CWX9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Gm10698-201ENSMUST00000182663 604 ntBASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx47Q9CWX9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx47Q9CWX9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx47Q9CWX9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms