Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Gm18032-201ENSMUST00000222541 538 ntBASIC18.62■□□□□ 0.57
Smc3Q9CW03 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.62■□□□□ 0.57
Smc3Q9CW03 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Gm10252-201ENSMUST00000209541 832 ntBASIC18.61■□□□□ 0.57
Smc3Q9CW03 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smc3Q9CW03 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Mir770-201ENSMUST00000103252 94 ntBASIC18.6■□□□□ 0.57
Smc3Q9CW03 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Smc3Q9CW03 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smc3Q9CW03 Sybu-209ENSMUST00000228639 4113 ntBASIC18.59■□□□□ 0.57
Smc3Q9CW03 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.59■□□□□ 0.57
Smc3Q9CW03 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Smc3Q9CW03 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smc3Q9CW03 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Smc3Q9CW03 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.58■□□□□ 0.57
Smc3Q9CW03 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smc3Q9CW03 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Smc3Q9CW03 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc3Q9CW03 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smc3Q9CW03 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc3Q9CW03 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc3Q9CW03 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms