Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm14140-201ENSMUST00000119999 995 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm11594-201ENSMUST00000122313 162 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Mir6404-201ENSMUST00000183699 94 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm5178-201ENSMUST00000219380 898 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.49□□□□□ -1.05
Sec61bQ9CQS8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Iqck-206ENSMUST00000208658 2891 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm5112-201ENSMUST00000204407 2368 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm4609-201ENSMUST00000106443 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm5138-201ENSMUST00000113842 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm15191-201ENSMUST00000117933 1000 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm12182-201ENSMUST00000118655 1008 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm13882-201ENSMUST00000120886 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm10284-201ENSMUST00000145057 1005 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm10481-201ENSMUST00000179228 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm2574-201ENSMUST00000181051 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm3200-201ENSMUST00000181493 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm8825-201ENSMUST00000182565 998 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm4518-201ENSMUST00000182638 718 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm8330-201ENSMUST00000182754 1008 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm4575-201ENSMUST00000182991 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm8709-201ENSMUST00000183230 1012 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 CT010431.1-201ENSMUST00000221249 1080 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms