Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Asic1-205ENSMUST00000228185 1818 ntBASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb1Q9CQ70 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Gm10231-201ENSMUST00000181584 441 ntBASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Gm10175-202ENSMUST00000208752 441 ntBASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2afb1Q9CQ70 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
H2afb1Q9CQ70 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Gm25016-201ENSMUST00000158399 131 ntBASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Gm6257-201ENSMUST00000163864 910 ntBASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Gm45328-201ENSMUST00000210942 917 ntBASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb1Q9CQ70 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
H2afb1Q9CQ70 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb1Q9CQ70 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms