Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gtf2ird2Q99NI3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Gm8097-201ENSMUST00000117903 829 ntBASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gtf2ird2Q99NI3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gtf2ird2Q99NI3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.22■□□□□ 0.19
Gtf2ird2Q99NI3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms