Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tlr3Q99MB1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Tlr3Q99MB1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tlr3Q99MB1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tlr3Q99MB1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tlr3Q99MB1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tlr3Q99MB1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Gm15372-201ENSMUST00000120729 834 ntBASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tlr3Q99MB1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Gm12895-201ENSMUST00000122214 226 ntBASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tlr3Q99MB1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Gm13884-201ENSMUST00000118103 829 ntBASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Tlr3Q99MB1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Gm27867-201ENSMUST00000184778 125 ntBASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.92■□□□□ 0.3
Tlr3Q99MB1 Gm9172-201ENSMUST00000212092 954 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms