Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-1Q99MA9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.77□□□□□ -0.04
Nkx6-1Q99MA9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Mir7023-201ENSMUST00000185093 64 ntBASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Gm45747-201ENSMUST00000212203 999 ntBASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-1Q99MA9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms