Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.68□□□□□ -0.06
Cdca3Q99M54 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdca3Q99M54 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.67□□□□□ -0.06
Cdca3Q99M54 Gm44450-201ENSMUST00000199528 114 ntBASIC14.67□□□□□ -0.06
Cdca3Q99M54 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdca3Q99M54 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Gm11594-201ENSMUST00000122313 162 ntBASIC14.66□□□□□ -0.06
Cdca3Q99M54 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.66□□□□□ -0.06
Cdca3Q99M54 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.66□□□□□ -0.06
Cdca3Q99M54 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdca3Q99M54 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdca3Q99M54 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdca3Q99M54 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdca3Q99M54 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdca3Q99M54 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdca3Q99M54 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms