Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm8825-201ENSMUST00000182565 998 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm4518-201ENSMUST00000182638 718 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm27494-201ENSMUST00000184735 189 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm37153-201ENSMUST00000193637 231 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cstf1Q99LC2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cstf1Q99LC2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cstf1Q99LC2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cstf1Q99LC2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms