Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.17■□□□□ 0.5
Rfc4Q99J62 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.17■□□□□ 0.5
Rfc4Q99J62 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfc4Q99J62 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.16■□□□□ 0.5
Rfc4Q99J62 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Haglr-201ENSMUST00000100000 2085 ntBASIC18.16■□□□□ 0.5
Rfc4Q99J62 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.16■□□□□ 0.5
Rfc4Q99J62 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfc4Q99J62 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Gm9682-201ENSMUST00000197505 556 ntBASIC18.15■□□□□ 0.5
Rfc4Q99J62 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc4Q99J62 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.14■□□□□ 0.49
Rfc4Q99J62 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.14■□□□□ 0.49
Rfc4Q99J62 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.14■□□□□ 0.49
Rfc4Q99J62 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfc4Q99J62 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc4Q99J62 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms