Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.64■□□□□ 0.57
Col20a1Q923P0 Gm45167-201ENSMUST00000208007 322 ntBASIC18.64■□□□□ 0.57
Col20a1Q923P0 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.64■□□□□ 0.57
Col20a1Q923P0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.63■□□□□ 0.57
Col20a1Q923P0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Gm14494-201ENSMUST00000118786 435 ntBASIC18.63■□□□□ 0.57
Col20a1Q923P0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.63■□□□□ 0.57
Col20a1Q923P0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col20a1Q923P0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.62■□□□□ 0.57
Col20a1Q923P0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Gm2213-201ENSMUST00000197485 688 ntBASIC18.62■□□□□ 0.57
Col20a1Q923P0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col20a1Q923P0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.62■□□□□ 0.57
Col20a1Q923P0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gm9682-201ENSMUST00000197505 556 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gm7787-201ENSMUST00000216858 688 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.61■□□□□ 0.57
Col20a1Q923P0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col20a1Q923P0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.6■□□□□ 0.57
Col20a1Q923P0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col20a1Q923P0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms