Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Gm27528-202ENSMUST00000222916 2012 ntBASIC14□□□□□ -0.17
Chmp1aQ921W0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chmp1aQ921W0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chmp1aQ921W0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp1aQ921W0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.99□□□□□ -0.17
Chmp1aQ921W0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Gm12527-201ENSMUST00000117967 564 ntBASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp1aQ921W0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Mir1199-201ENSMUST00000117015 119 ntBASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp1aQ921W0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms