Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1bQ920F6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.22■□□□□ 0.51
Smc1bQ920F6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.21■□□□□ 0.51
Smc1bQ920F6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.21■□□□□ 0.51
Smc1bQ920F6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1bQ920F6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.21■□□□□ 0.51
Smc1bQ920F6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Smc1bQ920F6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Gm26308-201ENSMUST00000157768 69 ntBASIC18.2■□□□□ 0.5
Smc1bQ920F6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.2■□□□□ 0.5
Smc1bQ920F6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.2■□□□□ 0.5
Smc1bQ920F6 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.2■□□□□ 0.5
Smc1bQ920F6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.2■□□□□ 0.5
Smc1bQ920F6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.19■□□□□ 0.5
Smc1bQ920F6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms