Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha3Q91Y16 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha3Q91Y16 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha3Q91Y16 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Prob1-201ENSMUST00000097619 3021 ntBASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha3Q91Y16 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gm12644-201ENSMUST00000119935 606 ntBASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gm27741-201ENSMUST00000185060 237 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms