Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdha9Q91Y11 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gm7153-201ENSMUST00000117092 455 ntBASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha9Q91Y11 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Gm8097-201ENSMUST00000117903 829 ntBASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha9Q91Y11 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha9Q91Y11 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha9Q91Y11 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha9Q91Y11 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha9Q91Y11 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha9Q91Y11 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha9Q91Y11 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha9Q91Y11 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms