Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb8Q91XZ2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Gm15794-201ENSMUST00000120182 631 ntBASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb8Q91XZ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb8Q91XZ2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb8Q91XZ2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdhb8Q91XZ2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb8Q91XZ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb8Q91XZ2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb8Q91XZ2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms