Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Rprl3-201ENSMUST00000157400 290 ntBASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.43□□□□□ -0.1
Nkd2Q8VE28 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkd2Q8VE28 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Prob1-201ENSMUST00000097619 3021 ntBASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd2Q8VE28 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Phf7-203ENSMUST00000226565 1971 ntBASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd2Q8VE28 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms