Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Gm9172-201ENSMUST00000212092 954 ntBASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sgms1Q8VCQ6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sgms1Q8VCQ6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sgms1Q8VCQ6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sgms1Q8VCQ6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms