Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf8Q8VC56 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Gm37722-201ENSMUST00000193757 208 ntBASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf8Q8VC56 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Gm6345-202ENSMUST00000180900 204 ntBASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf8Q8VC56 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rnf8Q8VC56 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Gm44450-201ENSMUST00000199528 114 ntBASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Gm18421-201ENSMUST00000204122 625 ntBASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf8Q8VC56 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms