Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gtf2a1lQ8R4I4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Gm27357-201ENSMUST00000183754 135 ntBASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gtf2a1lQ8R4I4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gtf2a1lQ8R4I4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gtf2a1lQ8R4I4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gtf2a1lQ8R4I4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms