Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC22.28■■□□□ 1.16
Cd109Q8R422 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cd109Q8R422 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC22.27■■□□□ 1.16
Cd109Q8R422 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Cd109Q8R422 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Cd109Q8R422 Gm14722-201ENSMUST00000118943 689 ntBASIC22.27■■□□□ 1.16
Cd109Q8R422 Gm13365-201ENSMUST00000121188 973 ntBASIC22.27■■□□□ 1.16
Cd109Q8R422 Rpph1-201ENSMUST00000175096 319 ntBASIC22.27■■□□□ 1.16
Cd109Q8R422 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Cd109Q8R422 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cd109Q8R422 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cd109Q8R422 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Cd109Q8R422 Gm16198-201ENSMUST00000118766 670 ntBASIC22.26■■□□□ 1.15
Cd109Q8R422 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cd109Q8R422 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Gm44335-201ENSMUST00000196879 141 ntBASIC22.26■■□□□ 1.15
Cd109Q8R422 Gm44297-201ENSMUST00000198304 141 ntBASIC22.26■■□□□ 1.15
Cd109Q8R422 Gm44346-201ENSMUST00000198851 141 ntBASIC22.26■■□□□ 1.15
Cd109Q8R422 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC22.26■■□□□ 1.15
Cd109Q8R422 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cd109Q8R422 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cd109Q8R422 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC22.26■■□□□ 1.15
Cd109Q8R422 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cd109Q8R422 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cd109Q8R422 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC22.25■■□□□ 1.15
Cd109Q8R422 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC22.25■■□□□ 1.15
Cd109Q8R422 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC22.25■■□□□ 1.15
Cd109Q8R422 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cd109Q8R422 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC22.24■■□□□ 1.15
Cd109Q8R422 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC22.24■■□□□ 1.15
Cd109Q8R422 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 AC157650.3-201ENSMUST00000225058 1476 ntBASIC22.24■■□□□ 1.15
Cd109Q8R422 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC22.24■■□□□ 1.15
Cd109Q8R422 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC22.24■■□□□ 1.15
Cd109Q8R422 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cd109Q8R422 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cd109Q8R422 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Gm13616-201ENSMUST00000120600 222 ntBASIC22.23■■□□□ 1.15
Cd109Q8R422 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Cd109Q8R422 Gm10499-201ENSMUST00000174094 934 ntBASIC22.23■■□□□ 1.15
Cd109Q8R422 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC22.23■■□□□ 1.15
Cd109Q8R422 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Cd109Q8R422 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC22.23■■□□□ 1.15
Cd109Q8R422 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cd109Q8R422 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Cd109Q8R422 Gm37171-201ENSMUST00000192636 1185 ntBASIC22.23■■□□□ 1.15
Cd109Q8R422 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC22.23■■□□□ 1.15
Cd109Q8R422 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms