Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacnb1Q8R3Z5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 2810403D21Rik-209ENSMUST00000207966 1433 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Gm18382-201ENSMUST00000194394 582 ntBASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Gm43771-201ENSMUST00000202931 1578 ntBASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacnb1Q8R3Z5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm15794-201ENSMUST00000120182 631 ntBASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm36967-201ENSMUST00000193814 266 ntBASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 AC156790.4-202ENSMUST00000228838 1418 ntBASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacnb1Q8R3Z5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm27704-201ENSMUST00000185094 107 ntBASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 CT009713.1-201ENSMUST00000224828 853 ntBASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacnb1Q8R3Z5 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.96■□□□□ 0.46
Cacnb1Q8R3Z5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms