Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc59Q8R2N0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc59Q8R2N0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Gm7791-201ENSMUST00000219066 539 ntBASIC15.02■□□□□ -0
Ccdc59Q8R2N0 Il3ra-202ENSMUST00000223589 738 ntBASIC15.02■□□□□ -0
Ccdc59Q8R2N0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc59Q8R2N0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc59Q8R2N0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc59Q8R2N0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc59Q8R2N0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms