Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Chmp7Q8R1T1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Gm44492-201ENSMUST00000197012 141 ntBASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp7Q8R1T1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Gm13597-201ENSMUST00000121239 375 ntBASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp7Q8R1T1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.14■□□□□ 0.82
Chmp7Q8R1T1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms