Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nudcd3Q8R1N4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Gm20760-201ENSMUST00000179197 648 ntBASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Nudcd3Q8R1N4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Gm13168-201ENSMUST00000121771 632 ntBASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nudcd3Q8R1N4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.83■□□□□ 0.13
Nudcd3Q8R1N4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Gm10653-202ENSMUST00000139570 835 ntBASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nudcd3Q8R1N4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms