Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Zcchc9Q8R1J3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Zcchc9Q8R1J3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.77■□□□□ 0.11
Zcchc9Q8R1J3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Zcchc9Q8R1J3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Zcchc9Q8R1J3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.76■□□□□ 0.11
Zcchc9Q8R1J3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zcchc9Q8R1J3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms