Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Gm18958-201ENSMUST00000174258 762 ntBASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim2Q8R1G6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim2Q8R1G6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Gm7638-201ENSMUST00000121348 967 ntBASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim2Q8R1G6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pdlim2Q8R1G6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pdlim2Q8R1G6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdlim2Q8R1G6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Gm18115-201ENSMUST00000221209 621 ntBASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim2Q8R1G6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms