Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Mir5131-201ENSMUST00000175426 93 ntBASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpp40Q8R1F9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Gm8344-201ENSMUST00000119813 856 ntBASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp40Q8R1F9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpp40Q8R1F9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Gm2651-201ENSMUST00000203560 838 ntBASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpp40Q8R1F9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rpp40Q8R1F9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpp40Q8R1F9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms