Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Atf7Q8R0S1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Gm9172-201ENSMUST00000212092 954 ntBASIC18.67■□□□□ 0.58
Atf7Q8R0S1 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atf7Q8R0S1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Gm15372-201ENSMUST00000120729 834 ntBASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atf7Q8R0S1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.65■□□□□ 0.58
Atf7Q8R0S1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf7Q8R0S1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf7Q8R0S1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atf7Q8R0S1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Gm27867-201ENSMUST00000184778 125 ntBASIC18.64■□□□□ 0.57
Atf7Q8R0S1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.64■□□□□ 0.57
Atf7Q8R0S1 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atf7Q8R0S1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms