Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Gm5312-201ENSMUST00000203728 547 ntBASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alms1Q8K4E0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.4■□□□□ 0.06
Alms1Q8K4E0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.4■□□□□ 0.06
Alms1Q8K4E0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Gm45747-201ENSMUST00000212203 999 ntBASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alms1Q8K4E0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Mir6977-201ENSMUST00000184960 64 ntBASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alms1Q8K4E0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms