Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim61Q8JZK6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim61Q8JZK6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim61Q8JZK6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Gm4995-201ENSMUST00000117247 432 ntBASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Gm27397-201ENSMUST00000184997 107 ntBASIC16.58■□□□□ 0.24
Trim61Q8JZK6 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.58■□□□□ 0.24
Trim61Q8JZK6 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim61Q8JZK6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Gm24513-201ENSMUST00000174964 138 ntBASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim61Q8JZK6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Gm5682-201ENSMUST00000173402 505 ntBASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim61Q8JZK6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim61Q8JZK6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms