Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist3h2bbQ8CGP0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist3h2bbQ8CGP0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm12366-201ENSMUST00000121722 873 ntBASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm5786-201ENSMUST00000085368 882 ntBASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.01□□□□□ -0.49
Hist3h2bbQ8CGP0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hist3h2bbQ8CGP0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms