Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.12□□□□□ -0.15
ShfQ8CG80 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.12□□□□□ -0.15
ShfQ8CG80 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.12□□□□□ -0.15
ShfQ8CG80 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ShfQ8CG80 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShfQ8CG80 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.12□□□□□ -0.15
ShfQ8CG80 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Gm6433-201ENSMUST00000118634 875 ntBASIC14.11□□□□□ -0.15
ShfQ8CG80 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ShfQ8CG80 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShfQ8CG80 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.1□□□□□ -0.15
ShfQ8CG80 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShfQ8CG80 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.1□□□□□ -0.15
ShfQ8CG80 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.09□□□□□ -0.15
ShfQ8CG80 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 Mir770-201ENSMUST00000103252 94 ntBASIC14.09□□□□□ -0.15
ShfQ8CG80 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShfQ8CG80 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ShfQ8CG80 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms