Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc28aQ8CEI3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.72■□□□□ 0.27
Ccdc28aQ8CEI3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc28aQ8CEI3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ccdc28aQ8CEI3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ccdc28aQ8CEI3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc28aQ8CEI3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc28aQ8CEI3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms