Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc38Q8CDN8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc38Q8CDN8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc38Q8CDN8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc38Q8CDN8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.57■□□□□ 0.4
Ccdc38Q8CDN8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc38Q8CDN8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms