Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm12895-201ENSMUST00000122214 226 ntBASIC17.44■□□□□ 0.38
Trim9Q8C7M3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm25745-201ENSMUST00000174945 133 ntBASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm17807-201ENSMUST00000186869 298 ntBASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim9Q8C7M3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm8825-201ENSMUST00000182565 998 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm4518-201ENSMUST00000182638 718 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim9Q8C7M3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.42■□□□□ 0.38
Trim9Q8C7M3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.41■□□□□ 0.38
Trim9Q8C7M3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms