Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.08■□□□□ 0
Cfap54Q8C6S9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.08■□□□□ 0
Cfap54Q8C6S9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cfap54Q8C6S9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.07■□□□□ 0
Cfap54Q8C6S9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap54Q8C6S9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gm10253-201ENSMUST00000194270 940 ntBASIC15.06■□□□□ 0
Cfap54Q8C6S9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gm5779-201ENSMUST00000218467 910 ntBASIC15.06■□□□□ 0
Cfap54Q8C6S9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap54Q8C6S9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap54Q8C6S9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cfap54Q8C6S9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.05■□□□□ 0
Cfap54Q8C6S9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap54Q8C6S9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Cfap54Q8C6S9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Gm6912-201ENSMUST00000117218 544 ntBASIC15.05■□□□□ -0
Cfap54Q8C6S9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap54Q8C6S9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.04■□□□□ -0
Cfap54Q8C6S9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cfap54Q8C6S9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms