Protein–RNA interactions for Protein: Q8C1C8

Pnma1, Paraneoplastic antigen Ma1 homolog, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnma1Q8C1C8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pnma1Q8C1C8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Gm7222-201ENSMUST00000117512 906 ntBASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pnma1Q8C1C8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 AV026068-213ENSMUST00000223675 1171 ntBASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pnma1Q8C1C8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pnma1Q8C1C8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Gm19164-201ENSMUST00000210667 640 ntBASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pnma1Q8C1C8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pnma1Q8C1C8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.33■□□□□ 0.37
Pnma1Q8C1C8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms