Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Gm20553-201ENSMUST00000204205 844 ntBASIC17.5■□□□□ 0.39
Snx17Q8BVL3 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx17Q8BVL3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Rprl2-201ENSMUST00000157150 290 ntBASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Gm22175-201ENSMUST00000175007 78 ntBASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx17Q8BVL3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Mir449b-201ENSMUST00000104833 80 ntBASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm23547-201ENSMUST00000158210 271 ntBASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx17Q8BVL3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Gm43125-201ENSMUST00000201724 730 ntBASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Snx17Q8BVL3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms