Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdk5rap1Q8BTW8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm27646-201ENSMUST00000183989 110 ntBASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdk5rap1Q8BTW8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm15590-201ENSMUST00000078419 552 ntBASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdk5rap1Q8BTW8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdk5rap1Q8BTW8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms