Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cpsf7Q8BTV2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Gm13436-201ENSMUST00000120418 567 ntBASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf7Q8BTV2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf7Q8BTV2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gm13559-201ENSMUST00000120476 863 ntBASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gm27463-201ENSMUST00000183569 57 ntBASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cpsf7Q8BTV2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms