Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne3Q8BT60 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm10052-201ENSMUST00000168019 960 ntBASIC15.31■□□□□ 0.04
Cpne3Q8BT60 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.31■□□□□ 0.04
Cpne3Q8BT60 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm7729-201ENSMUST00000050143 801 ntBASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm9987-201ENSMUST00000069768 567 ntBASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.31■□□□□ 0.04
Cpne3Q8BT60 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Gm18032-201ENSMUST00000222541 538 ntBASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne3Q8BT60 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Gm10013-201ENSMUST00000106074 672 ntBASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 App-207ENSMUST00000227737 2827 ntBASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne3Q8BT60 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms