Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.83□□□□□ -0.03
Ppp1r3eQ8BRJ4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm2274-201ENSMUST00000184539 609 ntBASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.83□□□□□ -0.04
Ppp1r3eQ8BRJ4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ppp1r3eQ8BRJ4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm26039-201ENSMUST00000158152 144 ntBASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ppp1r3eQ8BRJ4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ppp1r3eQ8BRJ4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms