Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.27■□□□□ 0.2
Suds3Q8BR65 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Suds3Q8BR65 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Suds3Q8BR65 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.27■□□□□ 0.19
Suds3Q8BR65 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Suds3Q8BR65 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.26■□□□□ 0.19
Suds3Q8BR65 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Suds3Q8BR65 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.25■□□□□ 0.19
Suds3Q8BR65 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Suds3Q8BR65 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Mir3081-201ENSMUST00000175305 84 ntBASIC16.24■□□□□ 0.19
Suds3Q8BR65 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms